diff --git a/server/docker/containers/cpuhorovod/Dockerfile b/server/docker/containers/cpuhorovod/Dockerfile index b616878..7a981b1 100644 --- a/server/docker/containers/cpuhorovod/Dockerfile +++ b/server/docker/containers/cpuhorovod/Dockerfile @@ -1,45 +1,7 @@ -ARG UBUNTU_VERSION=18.04 -FROM ubuntu:${UBUNTU_VERSION} +from horovod/horovod-cpu +# Switch to root user to install additional software +USER 0 -# Arguments for the build. UBUNTU_VERSION needs to be repeated because -# the first usage only applies to the FROM tag. -ARG UBUNTU_VERSION=18.04 -ARG MPI_KIND=OpenMPI -ARG PYTHON_VERSION=3.6 -ARG GPP_VERSION=7 -# NOTE: keep versions in sync with setup.py extras_require{'dev'}: -ARG TENSORFLOW_PACKAGE=tensorflow-cpu==1.15.0 -ARG KERAS_PACKAGE=keras==2.2.4 -ARG PYTORCH_PACKAGE=torch==1.2.0+cpu -ARG PYTORCH_LIGHTNING_PACKAGE=pytorch_lightning==0.7.6 -ARG TORCHVISION_PACKAGE=torchvision==0.4.0+cpu -ARG MXNET_PACKAGE=mxnet==1.5.0 -ARG PYSPARK_PACKAGE=pyspark==2.4.7 -# if SPARK_PACKAGE is set, installs Spark into /spark from the tgz archive -# if SPARK_PACKAGE is a preview version, installs PySpark from the tgz archive -# see https://archive.apache.org/dist/spark/ for available packages, version must match PYSPARK_PACKAGE -ARG SPARK_PACKAGE=spark-2.4.7/spark-2.4.7-bin-hadoop2.7.tgz -ARG CCL_PACKAGE=master -ARG HOROVOD_BUILD_FLAGS="" - -# Set default shell to /bin/bash -SHELL ["/bin/bash", "-cu"] - -# Prepare to install specific g++ versions -RUN apt-get update -qq && apt-get install -y --no-install-recommends software-properties-common -RUN add-apt-repository ppa:ubuntu-toolchain-r/test - -# Install essential packages. -RUN apt-get update -qq && apt-get install -y --no-install-recommends \ - wget \ - ca-certificates \ - cmake \ - openssh-client \ - openssh-server \ - git \ - build-essential \ - g++-${GPP_VERSION} \ - moreutils # Make sure we don't get notifications we can't answer during building. env DEBIAN_FRONTEND noninteractive @@ -48,11 +10,6 @@ env DEBIAN_FRONTEND noninteractive # Prepare scripts and configs add ./scripts/start /start -# Download and install everything from the repos. -run apt-get -q -y update; apt-get -q -y upgrade && \ - apt-get -q -y install sudo openssh-server && \ - mkdir /var/run/sshd - # Set root password run echo 'root:password' >> /root/passwdfile @@ -75,225 +32,10 @@ expose 22 # Assign /data as static volume. volume ["/data"] -# Install Python. -RUN apt-get update -qq && apt-get install -y python${PYTHON_VERSION} python${PYTHON_VERSION}-dev python${PYTHON_VERSION}-distutils -RUN ln -s -f /usr/bin/python${PYTHON_VERSION} /usr/bin/python -RUN ln -s -f /usr/bin/python${PYTHON_VERSION} /usr/bin/python${PYTHON_VERSION/%.*/} -RUN wget --progress=dot:mega https://bootstrap.pypa.io/get-pip.py && python get-pip.py && rm get-pip.py -RUN pip install --no-cache-dir -U --force pip setuptools requests pytest mock pytest-forked parameterized - -# Add launch helper scripts -RUN echo "env SPARK_HOME=/spark SPARK_DRIVER_MEM=512m PYSPARK_PYTHON=/usr/bin/python${PYTHON_VERSION} PYSPARK_DRIVER_PYTHON=/usr/bin/python${PYTHON_VERSION} \"\$@\"" > /spark_env.sh -RUN echo /spark_env.sh pytest -v --capture=no --continue-on-collection-errors --junit-xml=/artifacts/junit.\$1.\${HOROVOD_RANK:-\${OMPI_COMM_WORLD_RANK:-\${PMI_RANK}}}.\$2.xml \${@:2} > /pytest.sh -RUN echo /spark_env.sh pytest -v --capture=no --continue-on-collection-errors --junit-xml=/artifacts/junit.\$1.standalone.\$2.xml \${@:2} > /pytest_standalone.sh -RUN chmod a+x /spark_env.sh -RUN chmod a+x /pytest.sh -RUN chmod a+x /pytest_standalone.sh - -# Install Spark stand-alone cluster. -RUN if [[ -n ${SPARK_PACKAGE} ]]; then \ - wget --progress=dot:giga "https://www.apache.org/dyn/closer.lua/spark/${SPARK_PACKAGE}?action=download" -O - | tar -xzC /tmp; \ - archive=$(basename "${SPARK_PACKAGE}") bash -c "mv -v /tmp/\${archive/%.tgz/} /spark"; \ - fi - -# Install PySpark. -RUN apt-get update -qq && apt install -y openjdk-8-jdk-headless -RUN if [[ ${SPARK_PACKAGE} != *"-preview"* ]]; then \ - pip install --no-cache-dir ${PYSPARK_PACKAGE}; \ - else \ - apt-get update -qq && apt-get install pandoc; \ - pip install --no-cache-dir pypandoc; \ - (cd /spark/python && python setup.py sdist && pip install --no-cache-dir dist/pyspark-*.tar.gz && rm dist/pyspark-*); \ - fi - -# Install Ray. -RUN pip install --no-cache-dir ray==1.3.0 - -# Install MPI. -RUN if [[ ${MPI_KIND} == "OpenMPI" ]]; then \ - wget --progress=dot:mega -O /tmp/openmpi-3.0.0-bin.tar.gz https://github.com/horovod/horovod/files/1596799/openmpi-3.0.0-bin.tar.gz && \ - cd /usr/local && tar -zxf /tmp/openmpi-3.0.0-bin.tar.gz && ldconfig && \ - echo "mpirun -allow-run-as-root -np 2 -H localhost:2 -bind-to none -map-by slot -mca mpi_abort_print_stack 1" > /mpirun_command; \ - elif [[ ${MPI_KIND} == "ONECCL" ]]; then \ - wget --progress=dot:mega -O /tmp/oneccl.tar.gz https://github.com/oneapi-src/oneCCL/archive/${CCL_PACKAGE}.tar.gz && \ - cd /tmp && tar -zxf oneccl.tar.gz && \ - mkdir oneCCL-${CCL_PACKAGE}/build && cd oneCCL-${CCL_PACKAGE}/build && cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local/oneccl -DCMAKE_BUILD_TYPE=Release && make -j install && \ - cp /tmp/oneCCL-${CCL_PACKAGE}/mpi/include/*.h /usr/local/oneccl/include && \ - cp /tmp/oneCCL-${CCL_PACKAGE}/mpi/bin/mpicc /usr/local/oneccl/bin && \ - chmod +x /usr/local/oneccl/bin/mpicc && \ - cp /tmp/oneCCL-${CCL_PACKAGE}/mpi/bin/mpicxx /usr/local/oneccl/bin && \ - chmod +x /usr/local/oneccl/bin/mpicxx && \ - cp /tmp/oneCCL-${CCL_PACKAGE}/mpi/bin/mpigcc /usr/local/oneccl/bin && \ - chmod +x /usr/local/oneccl/bin/mpigcc && \ - cp /tmp/oneCCL-${CCL_PACKAGE}/mpi/bin/mpigxx /usr/local/oneccl/bin && \ - chmod +x /usr/local/oneccl/bin/mpigxx && \ - cp /tmp/oneCCL-${CCL_PACKAGE}/mpi/lib/libmpicxx.so /usr/local/oneccl/lib && \ - chmod +x /usr/local/oneccl/lib/libmpicxx.so && \ - cp /tmp/oneCCL-${CCL_PACKAGE}/mpi/lib/libmpifort.so /usr/local/oneccl/lib && \ - chmod +x /usr/local/oneccl/lib/libmpifort.so && \ - sed -i 's/if \[ -z \"\${I_MPI_ROOT}\" \]/if [ -z \"${I_MPI_ROOT:-}\" ]/g' /usr/local/oneccl/env/setvars.sh && \ - sed -i 's/ \$1/ \${1:-}/g' /usr/local/oneccl/env/setvars.sh && \ - echo ". /usr/local/oneccl/env/setvars.sh" > /oneccl_env && \ - chmod +x /oneccl_env && \ - echo "export CCL_ATL_TRANSPORT=ofi; \ - export HOROVOD_CCL_CACHE=1; \ - echo \"\$(env)\"; \ - echo \"mpirun is \$(which mpirun)\"; \ - echo \"LD_LIBRARY_PATH is \$(echo \$LD_LIBRARY_PATH)\"; \ - echo \"oneCCL links with \$(ldd /usr/local/oneccl/lib/libccl.so)\"; \ - mpirun -np 2 -hosts localhost \$@" > /mpirun_command_ofi && \ - chmod +x /mpirun_command_ofi && \ - cp /mpirun_command_ofi /mpirun_command_mpi && \ - sed -i 's/export CCL_ATL_TRANSPORT=ofi;/export CCL_ATL_TRANSPORT=mpi;/g' /mpirun_command_mpi && \ - sed -i 's/export HOROVOD_CCL_CACHE=1;/export HOROVOD_CCL_CACHE=0;/g' /mpirun_command_mpi && \ - echo "/mpirun_command_mpi" > /mpirun_command && \ - echo "-L/usr/local/oneccl/lib -lmpi -I/usr/local/oneccl/include" > /mpicc_oneccl && \ - chmod +x /mpicc_oneccl; \ - elif [[ ${MPI_KIND} == "MPICH" ]]; then \ - apt-get update -qq && apt-get install -y mpich && \ - echo "mpirun -np 2" > /mpirun_command; \ - fi - -# Install mpi4py. -RUN if [[ ${MPI_KIND} != "None" ]]; then \ - if [[ ${MPI_KIND} == "ONECCL" ]]; then \ - export I_MPI_ROOT=/usr/local/oneccl; \ - export MPICC=/usr/local/oneccl/bin/mpicc; \ - fi; \ - pip install --no-cache-dir mpi4py; \ - fi - -# Install TensorFlow and Keras (releases). -# Pin h5py only for tensorflow<2.5: https://github.com/h5py/h5py/issues/1732 -# Pin scipy!=1.4.0: https://github.com/scipy/scipy/issues/11237 -RUN if [[ ${TENSORFLOW_PACKAGE} != "tf-nightly" ]]; then \ - pip install --no-cache-dir ${TENSORFLOW_PACKAGE}; \ - if [[ ${KERAS_PACKAGE} != "None" ]]; then \ - if [[ ${TENSORFLOW_PACKAGE} == tensorflow*==1.* ]] || [[ ${TENSORFLOW_PACKAGE} == tensorflow*==2.[01234].* ]]; then \ - h5py="h5py<3"; \ - fi; \ - pip install --no-cache-dir ${KERAS_PACKAGE} ${h5py:-} "scipy!=1.4.0" "pandas<1.1.0"; \ - fi; \ - mkdir -p ~/.keras; \ - python -c "import tensorflow as tf; tf.keras.datasets.mnist.load_data()"; \ - fi - -# Install PyTorch (releases). -# Pin Pillow<7.0 for torchvision < 0.5.0: https://github.com/pytorch/vision/issues/1718 -RUN if [[ ${PYTORCH_PACKAGE} != "torch-nightly" ]]; then \ - pip install --no-cache-dir ${PYTORCH_PACKAGE} ${TORCHVISION_PACKAGE} -f https://download.pytorch.org/whl/torch_stable.html; \ - if [[ "${TORCHVISION_PACKAGE/%+*/}" == torchvision==0.[1234].* ]]; then \ - pip install --no-cache-dir "Pillow<7.0" --no-deps; \ - fi; \ - fi -RUN pip install ${PYTORCH_LIGHTNING_PACKAGE} - - -# Install MXNet (releases). -RUN if [[ ${MXNET_PACKAGE} != "mxnet-nightly" ]]; then \ - pip install --no-cache-dir ${MXNET_PACKAGE} ; \ - fi - -# Prefetch Spark MNIST dataset. -RUN mkdir -p /work -RUN mkdir -p /data && wget --progress=dot:mega https://horovod-datasets.s3.amazonaws.com/mnist.bz2 -O /data/mnist.bz2 - -# Prefetch Spark Rossmann dataset. -RUN mkdir -p /work -RUN mkdir -p /data && wget --progress=dot:mega https://horovod-datasets.s3.amazonaws.com/rossmann.tgz -O - | tar -xzC /data - -# Prefetch PyTorch datasets. -RUN wget --progress=dot:mega https://horovod-datasets.s3.amazonaws.com/pytorch_datasets.tgz -O - | tar -xzC /data - -### END OF CACHE ### -COPY . /horovod - -# Install nightly packages here so they do not get cached - -# Install TensorFlow and Keras (nightly). -# Do not pin h5py since tf>=2.5 requires h5py~=3.1 -# Pin scipy!=1.4.0: https://github.com/scipy/scipy/issues/11237 -RUN if [[ ${TENSORFLOW_PACKAGE} == "tf-nightly" ]]; then \ - pip install --no-cache-dir ${TENSORFLOW_PACKAGE}; \ - if [[ ${KERAS_PACKAGE} != "None" ]]; then \ - pip install --no-cache-dir ${KERAS_PACKAGE} "scipy!=1.4.0" "pandas<1.1.0"; \ - fi; \ - mkdir -p ~/.keras; \ - python -c "import tensorflow as tf; tf.keras.datasets.mnist.load_data()"; \ - fi - -# Install PyTorch (nightly). -# Pin Pillow<7.0 for torchvision < 0.5.0: https://github.com/pytorch/vision/issues/1718 -RUN if [[ ${PYTORCH_PACKAGE} == "torch-nightly" ]]; then \ - pip install --no-cache-dir --pre torch ${TORCHVISION_PACKAGE} -f https://download.pytorch.org/whl/nightly/cpu/torch_nightly.html; \ - if [[ "${TORCHVISION_PACKAGE/%+*/}" == torchvision==0.[1234].* ]]; then \ - pip install --no-cache-dir "Pillow<7.0" --no-deps; \ - fi; \ - fi - -# Install MXNet (nightly). -RUN if [[ ${MXNET_PACKAGE} == "mxnet-nightly" ]]; then \ - pip install --no-cache-dir --pre mxnet -f https://dist.mxnet.io/python/all; \ - fi - -# Install Horovod. -RUN if [[ ${MPI_KIND} == "ONECCL" ]]; then \ - if [ -z "${LD_LIBRARY_PATH:-}" ]; then \ - export LD_LIBRARY_PATH=""; \ - fi; \ - if [ -z "${PYTHONPATH:-}" ]; then \ - export PYTHONPATH=""; \ - fi; \ - . /usr/local/oneccl/env/setvars.sh; \ - export I_MPI_ROOT=/usr/local/oneccl; \ - echo "horovod python setup.py sdist, mpicxx is $(which mpicxx)"; \ - fi; \ - cd /horovod && \ - python setup.py sdist && \ - bash -c "${HOROVOD_BUILD_FLAGS} HOROVOD_WITH_TENSORFLOW=1 HOROVOD_WITH_PYTORCH=1 HOROVOD_WITH_MXNET=1 pip install --no-cache-dir -v $(ls /horovod/dist/horovod-*.tar.gz)[spark,ray]" - -# Hack for compatibility of MNIST example with TensorFlow 1.1.0. -RUN if [[ ${TENSORFLOW_PACKAGE} == "tensorflow==1.1.0" ]]; then \ - sed -i "s/from tensorflow import keras/from tensorflow.contrib import keras/" /horovod/examples/tensorflow/tensorflow_mnist.py; \ - fi - -# Hack TensorFlow MNIST example to be smaller. -RUN sed -i "s/last_step=20000/last_step=100/" /horovod/examples/tensorflow/tensorflow_mnist.py - -# Hack TensorFlow Eager MNIST example to be smaller. -RUN sed -i "s/dataset.take(20000/dataset.take(100/" /horovod/examples/tensorflow/tensorflow_mnist_eager.py - -# Hack TensorFlow 2.0 example to be smaller. -RUN sed -i "s/dataset.take(10000/dataset.take(100/" /horovod/examples/tensorflow2/tensorflow2_mnist.py - -# Hack Keras MNIST advanced example to be smaller. -RUN sed -i "s/'--epochs', type=int, default=24,/'--epochs', type=int, default=9,/" /horovod/examples/keras/keras_mnist_advanced.py -RUN sed -i "s/model.add(Conv2D(32, kernel_size=(3, 3),/model.add(Conv2D(1, kernel_size=(3, 3),/" /horovod/examples/keras/keras_mnist_advanced.py -RUN sed -i "s/model.add(Conv2D(64, (3, 3), activation='relu'))//" /horovod/examples/keras/keras_mnist_advanced.py - -# Hack TensorFlow 2.0 Keras MNIST advanced example to be smaller. -RUN sed -i "s/epochs = .*/epochs = 9/" /horovod/examples/tensorflow2/tensorflow2_keras_mnist.py -RUN sed -i "s/tf.keras.layers.Conv2D(32, \\[3, 3\\],/tf.keras.layers.Conv2D(1, [3, 3],/" /horovod/examples/tensorflow2/tensorflow2_keras_mnist.py -RUN sed -i "s/tf.keras.layers.Conv2D(64, \\[3, 3\\], activation='relu')),//" /horovod/examples/tensorflow2/tensorflow2_keras_mnist.py - -# Hack PyTorch MNIST example to be smaller. -RUN sed -i "s/'--epochs', type=int, default=10,/'--epochs', type=int, default=2,/" /horovod/examples/pytorch/pytorch_mnist.py -RUN sed -i "s/self.fc1 = nn.Linear(320, 50)/self.fc1 = nn.Linear(784, 50)/" /horovod/examples/pytorch/pytorch_mnist.py -RUN sed -i "s/x = F.relu(F.max_pool2d(self.conv1(x), 2))//" /horovod/examples/pytorch/pytorch_mnist.py -RUN sed -i "s/x = F.relu(F.max_pool2d(self.conv2_drop(self.conv2(x)), 2))//" /horovod/examples/pytorch/pytorch_mnist.py -RUN sed -i "s/x = x.view(-1, 320)/x = x.view(-1, 784)/" /horovod/examples/pytorch/pytorch_mnist.py - -# Hack Keras Spark Rossmann Run example to be smaller. -RUN sed -i "s/x = Dense(1000,/x = Dense(100,/g" /horovod/examples/spark/keras/keras_spark_rossmann_run.py -RUN sed -i "s/x = Dense(500,/x = Dense(50,/g" /horovod/examples/spark/keras/keras_spark_rossmann_run.py - -# Hack Keras Spark Rossmann Estimator example to be smaller. -RUN sed -i "s/x = Dense(1000,/x = Dense(100,/g" /horovod/examples/spark/keras/keras_spark_rossmann_estimator.py -RUN sed -i "s/x = Dense(500,/x = Dense(50,/g" /horovod/examples/spark/keras/keras_spark_rossmann_estimator.py # Fix all permissions run chmod +x /start # Starting sshd -cmd ["/start"] +cmd ["/start"] \ No newline at end of file